MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Granulicatella sp.
19428wC4_WM01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 219
bases: 2,027,228 bps
CDS: 1,683
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 1,736
Total number of protein coding genes annotated/found:
1,683
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5034|JADGLB010000009.1
SEQF5034_01736
Genome Viewer
NA
AA
639/213
44236-43598
ISL3 family transposase ISSpn3
SEQF5034|JADGLB010000009.1
SEQF5034_01735
Genome Viewer
NA
AA
2403/801
43473-41071
Copper-exporting P-type ATPase
SEQF5034|JADGLB010000009.1
SEQF5034_01734
Genome Viewer
NA
AA
429/143
41069-40641
Transcriptional repressor CopY
SEQF5034|JADGLB010000009.1
SEQF5034_01733
Genome Viewer
NA
AA
972/324
39507-40478
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01732
Genome Viewer
NA
AA
1068/356
37934-39001
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01731
Genome Viewer
NA
AA
645/215
37758-37114
Thymidylate kinase
SEQF5034|JADGLB010000009.1
SEQF5034_01730
Genome Viewer
NA
AA
330/110
37101-36772
Cyclic di-AMP receptor A
SEQF5034|JADGLB010000009.1
SEQF5034_01729
Genome Viewer
NA
AA
981/327
36761-35781
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01728
Genome Viewer
NA
AA
333/111
35777-35445
Initiation-control protein YabA
SEQF5034|JADGLB010000009.1
SEQF5034_01727
Genome Viewer
NA
AA
1098/366
35270-34173
Glycerol dehydrogenase
SEQF5034|JADGLB010000009.1
SEQF5034_01726
Genome Viewer
NA
AA
1233/411
34183-32951
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01725
Genome Viewer
NA
AA
330/110
31613-31942
putative ABC transporter ATP-binding protein
SEQF5034|JADGLB010000009.1
SEQF5034_01724
Genome Viewer
NA
AA
195/65
31210-31404
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01723
Genome Viewer
NA
AA
690/230
31081-30392
Putative carboxypeptidase YodJ
SEQF5034|JADGLB010000009.1
SEQF5034_01722
Genome Viewer
NA
AA
813/271
29786-28974
Undecaprenyl-diphosphatase
SEQF5034|JADGLB010000009.1
SEQF5034_01721
Genome Viewer
NA
AA
1152/384
27477-28628
Putative transport protein
SEQF5034|JADGLB010000009.1
SEQF5034_01720
Genome Viewer
NA
AA
621/207
26826-27446
hypothetical protein
SEQF5034|JADGLB010000009.1
SEQF5034_01719
Genome Viewer
NA
AA
1218/406
25357-26574
Hippurate hydrolase
SEQF5034|JADGLB010000009.1
SEQF5034_01718
Genome Viewer
NA
AA
717/239
24637-23921
HTH-type transcriptional repressor NagR
SEQF5034|JADGLB010000009.1
SEQF5034_01717
Genome Viewer
NA
AA
1170/390
23909-22740
Putative D-galactosamine-6-phosphate deaminase AgaS
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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